Insertion (htsjdk 2.18.2 API)

java.lang.Object
- htsjdk.samtools.cram.encoding.readfeatures.Insertion

All Implemented Interfaces:

ReadFeature, Serializable
```
public class Insertion
extends Object
implements Serializable, ReadFeature
```
A read feature representing a multi-base insertion.

See Also:

Serialized Form

Field Summary

Fields
Modifier and Type Field Description

static byte operator

Constructor Summary

Constructors
Constructor Description

Insertion()

Insertion(int position, byte[] sequence)

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`boolean`	`equals(Object o)`
`byte`	`getOperator()`	Read features are distinguished by operator, similar to cigar operator.
`int`	`getPosition()`
`byte[]`	`getSequence()`
`int`	`hashCode()`
`void`	`setPosition(int position)`
`void`	`setSequence(byte[] sequence)`
`String`	`toString()`

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

- Field Detail
  - operator
```
public static final byte operator
```
    See Also:
    
    Constant Field Values
- Constructor Detail
  - Insertion
```
public Insertion()
```
  - Insertion
```
public Insertion(int position,
                 byte[] sequence)
```
- Method Detail
  - getOperator
```
public byte getOperator()
```
    Description copied from interface: ReadFeature
    
    Read features are distinguished by operator, similar to cigar operator.
    
    Specified by:
    
    getOperator in interface ReadFeature
    
    Returns:
    
    type of the read feature
  - getPosition
```
public int getPosition()
```
    Specified by:
    
    getPosition in interface ReadFeature
    
    Returns:
    
    zero-based position in the read
  - setPosition
```
public void setPosition(int position)
```
    Specified by:
    
    setPosition in interface ReadFeature
  - getSequence
```
public byte[] getSequence()
```
  - setSequence
```
public void setSequence(byte[] sequence)
```
  - toString
```
public String toString()
```
    Overrides:
    
    toString in class Object
  - equals
```
public boolean equals(Object o)
```
    Overrides:
    
    equals in class Object
  - hashCode
```
public int hashCode()
```
    Overrides:
    
    hashCode in class Object